Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm7857-201ENSMUST00000117957 358 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm12501-201ENSMUST00000119163 529 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm37466-201ENSMUST00000195692 652 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm5714-201ENSMUST00000197343 566 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm2965-201ENSMUST00000198365 343 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 AU022133-201ENSMUST00000200601 873 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.33□□□□□ -0.6
Trim50Q810I2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim50Q810I2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim50Q810I2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm8815-201ENSMUST00000173809 620 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm8100-201ENSMUST00000182906 988 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Mir8093-201ENSMUST00000185043 137 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm5982-201ENSMUST00000196234 512 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm45575-201ENSMUST00000210283 548 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Gm21811-201ENSMUST00000096485 930 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim50Q810I2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.32□□□□□ -0.6
Trim50Q810I2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms