Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf139Q7TMV1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm14193-201ENSMUST00000105067 153 ntBASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm9062-201ENSMUST00000117712 727 ntBASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm8420-201ENSMUST00000097103 598 ntBASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf139Q7TMV1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Erich3-203ENSMUST00000189969 3460 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm22920-201ENSMUST00000102175 109 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm7150-201ENSMUST00000122032 981 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.4□□□□□ -0.42
Rnf139Q7TMV1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms