Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx55Q6ZPL9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm22594-201ENSMUST00000104251 130 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm25562-201ENSMUST00000104608 133 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm13284-201ENSMUST00000121020 547 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm14165-201ENSMUST00000121456 952 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm13981-201ENSMUST00000122360 447 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx55Q6ZPL9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23612-201ENSMUST00000103823 110 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm6158-201ENSMUST00000109467 904 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm15196-201ENSMUST00000121406 482 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25604-201ENSMUST00000158359 133 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23400-201ENSMUST00000174994 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm26463-201ENSMUST00000175065 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm24332-201ENSMUST00000175102 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25959-201ENSMUST00000175112 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm22475-201ENSMUST00000175169 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm22903-201ENSMUST00000175193 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25070-201ENSMUST00000175237 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm24159-201ENSMUST00000175264 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25299-201ENSMUST00000175283 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23798-201ENSMUST00000175560 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23802-201ENSMUST00000175565 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25708-201ENSMUST00000177687 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm24370-201ENSMUST00000178007 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23049-201ENSMUST00000178068 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm28019-201ENSMUST00000178138 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25571-201ENSMUST00000178322 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25355-201ENSMUST00000178456 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm24975-201ENSMUST00000178492 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23189-201ENSMUST00000178954 102 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm25100-201ENSMUST00000179750 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23064-201ENSMUST00000179866 101 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm23576-201ENSMUST00000179918 110 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Gm18035-201ENSMUST00000211962 589 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Capsl-202ENSMUST00000226688 739 ntBASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx55Q6ZPL9 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms