Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm8602-201ENSMUST00000184045 607 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm19087-201ENSMUST00000191430 946 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scaf4Q6PFF0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Gm5455-201ENSMUST00000058710 715 ntBASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.43□□□□□ -0.58
Scaf4Q6PFF0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms