Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm12663-201ENSMUST00000118481 958 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm15620-201ENSMUST00000122949 270 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm24809-201ENSMUST00000175318 271 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm18801-201ENSMUST00000186616 536 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Snrnp40Q6PE01 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Snrnp40Q6PE01 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms