Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm5035-201ENSMUST00000215581 927 ntBASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm6091-201ENSMUST00000098307 165 ntBASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf220Q6PDX6 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm43823-201ENSMUST00000197391 1808 ntBASIC11□□□□□ -0.65
Rnf220Q6PDX6 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm29649-201ENSMUST00000185649 419 ntBASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 AC022775.2-201ENSMUST00000227885 646 ntBASIC11□□□□□ -0.65
Rnf220Q6PDX6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11□□□□□ -0.65
Rnf220Q6PDX6 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Rgr-203ENSMUST00000225070 4704 ntBASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gm8018-201ENSMUST00000173536 789 ntBASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf220Q6PDX6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms