Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm6082-201ENSMUST00000215204 454 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Rgr-203ENSMUST00000225070 4704 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt39Q6IFX4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt39Q6IFX4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms