Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scube3Q66PY1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scube3Q66PY1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm26831-201ENSMUST00000181458 1380 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm14058-201ENSMUST00000116082 735 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm13035-201ENSMUST00000117496 342 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm7113-201ENSMUST00000120477 958 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm13487-201ENSMUST00000122240 864 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm25295-201ENSMUST00000122794 306 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm4482-201ENSMUST00000200876 742 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm5369-201ENSMUST00000217499 588 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 AC154634.2-201ENSMUST00000225983 1184 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm10288-201ENSMUST00000084614 537 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.44□□□□□ -0.42
Scube3Q66PY1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.44□□□□□ -0.42
Scube3Q66PY1 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm9499-201ENSMUST00000180888 964 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm42619-201ENSMUST00000197564 1136 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm35960-201ENSMUST00000202712 767 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm45575-201ENSMUST00000210283 548 ntBASIC12.43□□□□□ -0.42
Scube3Q66PY1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scube3Q66PY1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms