Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Scn9aQ62205 Gm15625-201ENSMUST00000117617 1093 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.46□□□□□ -0.25
Scn9aQ62205 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.46□□□□□ -0.25
Scn9aQ62205 Gm43002-201ENSMUST00000200310 155 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Scn9aQ62205 Gm6478-201ENSMUST00000099450 742 ntBASIC13.46□□□□□ -0.25
Scn9aQ62205 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn9aQ62205 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.46□□□□□ -0.26
Scn9aQ62205 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Scn9aQ62205 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn9aQ62205 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm6758-201ENSMUST00000119643 1055 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm6612-201ENSMUST00000170777 395 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm19927-201ENSMUST00000185792 781 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm44008-201ENSMUST00000204345 412 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm44740-201ENSMUST00000205603 1614 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm23439-201ENSMUST00000104292 132 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm26313-201ENSMUST00000157770 308 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn9aQ62205 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn9aQ62205 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.45□□□□□ -0.26
Scn9aQ62205 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scn9aQ62205 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm16209-201ENSMUST00000118457 627 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm10171-201ENSMUST00000126220 628 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm7589-201ENSMUST00000085631 534 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms