Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ctr9Q62018 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ctr9Q62018 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm23045-201ENSMUST00000175041 96 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm3508-201ENSMUST00000186012 792 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm8285-201ENSMUST00000208293 759 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm10179-201ENSMUST00000086233 688 ntBASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ctr9Q62018 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ctr9Q62018 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm16166-201ENSMUST00000118291 787 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm7150-201ENSMUST00000122032 981 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm29787-201ENSMUST00000222129 849 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ctr9Q62018 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.74□□□□□ -0.21
Ctr9Q62018 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Gm8737-201ENSMUST00000122208 642 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Gm2517-201ENSMUST00000215651 348 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.73□□□□□ -0.21
Ctr9Q62018 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms