Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm38349-201ENSMUST00000195732 462 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm5526-201ENSMUST00000153604 423 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm22662-201ENSMUST00000175290 256 ntBASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col12a1Q60847 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col12a1Q60847 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.15□□□□□ -0.63
Col12a1Q60847 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.15□□□□□ -0.63
Col12a1Q60847 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Gm26379-201ENSMUST00000178125 138 ntBASIC11.15□□□□□ -0.63
Col12a1Q60847 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.15□□□□□ -0.63
Col12a1Q60847 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col12a1Q60847 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Mir8091-201ENSMUST00000183602 139 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm42821-201ENSMUST00000199771 489 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm29651-201ENSMUST00000189088 697 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm9409-201ENSMUST00000197017 316 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm44420-201ENSMUST00000203669 490 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms