Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm10312-201ENSMUST00000078515 489 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.09□□□□□ -0.63
Nr1h4Q60641 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nr1h4Q60641 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nr1h4Q60641 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm12015-201ENSMUST00000117065 843 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm11511-201ENSMUST00000118146 540 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Lect2-202ENSMUST00000225183 823 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Morn2-202ENSMUST00000227729 656 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nr1h4Q60641 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm25214-201ENSMUST00000104573 129 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms