Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim38Q5SZ99 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.07□□□□□ -0.48
Trim38Q5SZ99 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm8815-201ENSMUST00000173809 620 ntBASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm43966-201ENSMUST00000203301 612 ntBASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm18730-201ENSMUST00000218038 343 ntBASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim38Q5SZ99 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gm8385-201ENSMUST00000058999 643 ntBASIC12.06□□□□□ -0.48
Trim38Q5SZ99 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim38Q5SZ99 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms