Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm8342-201ENSMUST00000209839 757 ntBASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps54Q5SPW0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm11244-201ENSMUST00000121243 237 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm8737-201ENSMUST00000122208 642 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm21092-201ENSMUST00000178995 955 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm37981-201ENSMUST00000194280 535 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm45398-201ENSMUST00000210561 165 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm5996-201ENSMUST00000211110 718 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps54Q5SPW0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms