Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm7003-201ENSMUST00000195089 312 ntBASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm12380-201ENSMUST00000119012 544 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm18038-201ENSMUST00000197900 485 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm807-202ENSMUST00000224929 408 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav5d-4Q5R1F6 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5d-4Q5R1F6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm3332-201ENSMUST00000189337 928 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms