Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Gm23105-201ENSMUST00000083719 134 ntBASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rc3h1Q4VGL6 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Gm9089-201ENSMUST00000122027 526 ntBASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rc3h1Q4VGL6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm14667-201ENSMUST00000119448 1350 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm12247-201ENSMUST00000117585 670 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm15615-201ENSMUST00000118876 198 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm11451-201ENSMUST00000118946 630 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm13937-201ENSMUST00000121000 988 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm26047-201ENSMUST00000157308 113 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Mir1956-201ENSMUST00000157748 65 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm37905-201ENSMUST00000195310 341 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm34023-201ENSMUST00000195539 217 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm26047-202ENSMUST00000198840 115 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Gm5451-201ENSMUST00000080545 579 ntBASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Rc3h1Q4VGL6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rc3h1Q4VGL6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Rc3h1Q4VGL6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rc3h1Q4VGL6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rc3h1Q4VGL6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rc3h1Q4VGL6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms