Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm42687-201ENSMUST00000199075 164 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Snord23-201ENSMUST00000116828 109 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm18504-201ENSMUST00000220917 929 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm3379-201ENSMUST00000222259 642 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm16184-201ENSMUST00000162324 573 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm20091-201ENSMUST00000179683 189 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm24466-201ENSMUST00000179978 109 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Tspy-ps-203ENSMUST00000186546 989 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm19918-201ENSMUST00000194858 400 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm44173-201ENSMUST00000204316 132 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm44540-201ENSMUST00000205640 354 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Spg11Q3UHA3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm13777-201ENSMUST00000118208 345 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm5526-201ENSMUST00000153604 423 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm22662-201ENSMUST00000175290 256 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm26943-201ENSMUST00000182295 957 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Mir6930-201ENSMUST00000183859 68 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm7445-201ENSMUST00000192115 340 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC10.65□□□□□ -0.71
Spg11Q3UHA3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms