Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm5312-201ENSMUST00000203728 547 ntBASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.51□□□□□ -0.89
Trim63Q38HM4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.51□□□□□ -0.89
Trim63Q38HM4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.51□□□□□ -0.89
Trim63Q38HM4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm17271-201ENSMUST00000165535 355 ntBASIC9.5□□□□□ -0.89
Trim63Q38HM4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.5□□□□□ -0.89
Trim63Q38HM4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.5□□□□□ -0.89
Trim63Q38HM4 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim63Q38HM4 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm44914-201ENSMUST00000207191 2720 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.49□□□□□ -0.89
Trim63Q38HM4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trim63Q38HM4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 318.5 ms