Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC187103.1-202ENSMUST00000223904 1536 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm44936-201ENSMUST00000207324 735 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm10729-202ENSMUST00000193403 1375 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm46992-201ENSMUST00000222120 1389 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm5174-201ENSMUST00000171131 1423 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm37886-201ENSMUST00000195349 1513 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm25455-201ENSMUST00000157946 325 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC122891.1-201ENSMUST00000218671 268 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 AC154806.7-201ENSMUST00000227998 202 ntBASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ush2AQ2QI47 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm11203-201ENSMUST00000122169 741 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm17228-201ENSMUST00000165006 491 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm44388-201ENSMUST00000204350 258 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 AC162893.1-201ENSMUST00000207732 1085 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm3889-201ENSMUST00000212467 612 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm11427-201ENSMUST00000117952 1696 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm5046-201ENSMUST00000100608 611 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm30196-201ENSMUST00000208957 160 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 AC116390.1-201ENSMUST00000227975 670 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm5822-201ENSMUST00000161562 1378 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm11307-201ENSMUST00000121088 929 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm44124-201ENSMUST00000204159 472 ntBASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC5.91□□□□□ -1.46
Ush2AQ2QI47 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms