Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Gm10169-201ENSMUST00000121822 348 ntBASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Gm6677-201ENSMUST00000195100 441 ntBASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Znf541Q0GGX2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.6□□□□□ -0.07
Znf541Q0GGX2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm9673-201ENSMUST00000119287 781 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Gm45219-201ENSMUST00000205602 465 ntBASIC14.59□□□□□ -0.07
Znf541Q0GGX2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.58□□□□□ -0.07
Znf541Q0GGX2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Znf541Q0GGX2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Znf541Q0GGX2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Znf541Q0GGX2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Znf541Q0GGX2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm13937-201ENSMUST00000121000 988 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm16165-201ENSMUST00000160140 795 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm42518-201ENSMUST00000196277 938 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Znf541Q0GGX2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Mir6998-201ENSMUST00000183343 64 ntBASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.57□□□□□ -0.08
Znf541Q0GGX2 Gm9111-201ENSMUST00000219394 709 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms