Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm5616-201ENSMUST00000165252 384 ntBASIC11.71□□□□□ -0.53
Pfdn6Q03958 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm8741-201ENSMUST00000174736 384 ntBASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm7584-201ENSMUST00000175829 940 ntBASIC11.71□□□□□ -0.53
Pfdn6Q03958 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm45433-201ENSMUST00000209386 247 ntBASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn6Q03958 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn6Q03958 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm17376-201ENSMUST00000166016 84 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm26448-201ENSMUST00000082446 203 ntBASIC11.7□□□□□ -0.54
Pfdn6Q03958 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn6Q03958 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm26083-201ENSMUST00000157904 193 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm6450-201ENSMUST00000200896 574 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 Gm8913-201ENSMUST00000209491 641 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms