Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col1a2Q01149 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.46□□□□□ -0.09
Col1a2Q01149 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col1a2Q01149 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col1a2Q01149 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.46□□□□□ -0.09
Col1a2Q01149 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col1a2Q01149 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Col1a2Q01149 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm14807-201ENSMUST00000116640 983 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm14270-201ENSMUST00000118388 846 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm9673-201ENSMUST00000119287 781 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm15197-201ENSMUST00000120526 478 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm23218-201ENSMUST00000158124 276 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm18776-201ENSMUST00000188833 654 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm18514-201ENSMUST00000218980 436 ntBASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Col1a2Q01149 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col1a2Q01149 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col1a2Q01149 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.45□□□□□ -0.1
Col1a2Q01149 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Gm12628-201ENSMUST00000122193 382 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.45□□□□□ -0.1
Col1a2Q01149 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.45□□□□□ -0.1
Col1a2Q01149 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 Gm7082-201ENSMUST00000209880 969 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.45□□□□□ -0.1
Col1a2Q01149 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Col1a2Q01149 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a2Q01149 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Matn2-203ENSMUST00000226766 3252 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm17192-201ENSMUST00000169031 511 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm19246-201ENSMUST00000173599 255 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm10254-201ENSMUST00000052888 867 ntBASIC14.44□□□□□ -0.1
Col1a2Q01149 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Col1a2Q01149 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a2Q01149 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms