Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Gm10179-201ENSMUST00000086233 688 ntBASIC11.04□□□□□ -0.64
Nkx3-2P97503 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.04□□□□□ -0.64
Nkx3-2P97503 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.04□□□□□ -0.64
Nkx3-2P97503 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx3-2P97503 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Btrc-209ENSMUST00000224478 2194 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm15131-201ENSMUST00000119124 595 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm12036-201ENSMUST00000120008 530 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm28686-201ENSMUST00000187404 609 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm6867-201ENSMUST00000219165 425 ntBASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx3-2P97503 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Nkx3-2P97503 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Nkx3-2P97503 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm17391-201ENSMUST00000171036 126 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm29499-201ENSMUST00000189151 486 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm28329-201ENSMUST00000191208 689 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm29171-201ENSMUST00000191397 486 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm38117-201ENSMUST00000194653 939 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm5051-201ENSMUST00000204085 485 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm17831-201ENSMUST00000205579 900 ntBASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx3-2P97503 Gm45550-201ENSMUST00000209380 946 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms