Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hmgb1P63158 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Hmgb1P63158 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hmgb1P63158 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Hmgb1P63158 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Gm13665-201ENSMUST00000120830 528 ntBASIC12.83□□□□□ -0.36
Hmgb1P63158 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Gm20482-202ENSMUST00000174729 825 ntBASIC12.83□□□□□ -0.36
Hmgb1P63158 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Rps4l-202ENSMUST00000204242 789 ntBASIC12.83□□□□□ -0.36
Hmgb1P63158 Gm3961-201ENSMUST00000204425 994 ntBASIC12.83□□□□□ -0.36
Hmgb1P63158 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Hmgb1P63158 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.83□□□□□ -0.36
Hmgb1P63158 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgb1P63158 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgb1P63158 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm28937-201ENSMUST00000185413 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm29400-201ENSMUST00000187208 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm28662-201ENSMUST00000188446 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm28251-201ENSMUST00000188835 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm37318-201ENSMUST00000194325 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm38017-201ENSMUST00000194768 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm37287-201ENSMUST00000195449 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm37793-201ENSMUST00000195548 695 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Gm807-202ENSMUST00000224929 408 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmgb1P63158 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.82□□□□□ -0.36
Hmgb1P63158 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Hmgb1P63158 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgb1P63158 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgb1P63158 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms