Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Rims2-204ENSMUST00000226410 3685 ntBASIC10.53□□□□□ -0.72
Lsm3P62311 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm3P62311 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm3P62311 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Lsm3P62311 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.52□□□□□ -0.72
Lsm3P62311 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Lsm3P62311 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.52□□□□□ -0.72
Lsm3P62311 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm3P62311 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm3P62311 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lsm3P62311 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lsm3P62311 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.52□□□□□ -0.73
Lsm3P62311 Gm42937-201ENSMUST00000197360 752 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.52□□□□□ -0.73
Lsm3P62311 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm3P62311 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lsm3P62311 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.51□□□□□ -0.73
Lsm3P62311 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 AA474408-201ENSMUST00000098110 3339 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Gm24934-201ENSMUST00000103764 111 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.51□□□□□ -0.73
Lsm3P62311 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm15610-201ENSMUST00000120584 195 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Lsm3P62311 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm44771-201ENSMUST00000206975 626 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Gm45925-201ENSMUST00000218882 744 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.51□□□□□ -0.73
Lsm3P62311 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lsm3P62311 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm3P62311 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.5□□□□□ -0.73
Lsm3P62311 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Lsm3P62311 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Lsm3P62311 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lsm3P62311 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms