Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm12241-201ENSMUST00000118330 726 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm29396-201ENSMUST00000185659 716 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm43118-201ENSMUST00000199149 775 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm10608-202ENSMUST00000213924 676 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.34□□□□□ -0.75
Sf3b6P59708 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm13316-201ENSMUST00000140537 691 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm25043-201ENSMUST00000158604 212 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm27501-201ENSMUST00000183599 107 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm28923-201ENSMUST00000187755 322 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.33□□□□□ -0.76
Sf3b6P59708 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms