Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdkn2bP55271 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.1□□□□□ -0.63
Cdkn2bP55271 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gm27501-201ENSMUST00000183599 107 ntBASIC11.1□□□□□ -0.63
Cdkn2bP55271 Rps4l-202ENSMUST00000204242 789 ntBASIC11.1□□□□□ -0.63
Cdkn2bP55271 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.1□□□□□ -0.63
Cdkn2bP55271 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cdkn2bP55271 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm12463-201ENSMUST00000118271 849 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm12241-201ENSMUST00000118330 726 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm2991-201ENSMUST00000173338 480 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Gm7940-201ENSMUST00000218195 769 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdkn2bP55271 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2bP55271 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Cdkn2bP55271 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2bP55271 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdkn2bP55271 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2bP55271 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms