Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm22133-201ENSMUST00000102082 109 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Gm26286-201ENSMUST00000104166 134 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Fdft1P53798 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm15004-201ENSMUST00000119192 630 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.63□□□□□ -0.55
Fdft1P53798 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.63□□□□□ -0.55
Fdft1P53798 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fdft1P53798 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fdft1P53798 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Gm9192-201ENSMUST00000183221 985 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Gm27627-201ENSMUST00000183644 150 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Gm44262-201ENSMUST00000204969 372 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.62□□□□□ -0.55
Fdft1P53798 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fdft1P53798 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fdft1P53798 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Fdft1P53798 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fdft1P53798 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fdft1P53798 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.62□□□□□ -0.55
Fdft1P53798 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Gm11700-201ENSMUST00000119409 403 ntBASIC11.61□□□□□ -0.55
Fdft1P53798 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.61□□□□□ -0.55
Fdft1P53798 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fdft1P53798 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fdft1P53798 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms