Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Gm9544-201ENSMUST00000223349 2482 ntBASIC17.62■□□□□ 0.41
Cux1P53564 AC164429.1-201ENSMUST00000224210 518 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Cux1P53564 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cux1P53564 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Cux1P53564 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Gm42943-201ENSMUST00000199676 3242 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm15519-201ENSMUST00000120088 1566 ntBASIC17.62■□□□□ 0.41
Cux1P53564 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cux1P53564 Gm14005-209ENSMUST00000224993 1832 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cux1P53564 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC17.62■□□□□ 0.41
Cux1P53564 Gm6606-201ENSMUST00000193613 947 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm37197-201ENSMUST00000195607 401 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC17.62■□□□□ 0.41
Cux1P53564 Gm43002-201ENSMUST00000200310 155 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm45094-201ENSMUST00000207013 617 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm9204-201ENSMUST00000212641 947 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Gm7589-201ENSMUST00000085631 534 ntBASIC17.62■□□□□ 0.41
Cux1P53564 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cux1P53564 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.61■□□□□ 0.41
Cux1P53564 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cux1P53564 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC17.61■□□□□ 0.41
Cux1P53564 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Cux1P53564 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cux1P53564 Gm9166-201ENSMUST00000120293 561 ntBASIC17.61■□□□□ 0.41
Cux1P53564 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC17.61■□□□□ 0.41
Cux1P53564 Mir432-201ENSMUST00000157230 75 ntBASIC17.61■□□□□ 0.41
Cux1P53564 Gm26368-201ENSMUST00000157826 118 ntBASIC17.61■□□□□ 0.41
Cux1P53564 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC17.61■□□□□ 0.41
Cux1P53564 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cux1P53564 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cux1P53564 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.61■□□□□ 0.41
Cux1P53564 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cux1P53564 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Cux1P53564 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Btrc-209ENSMUST00000224478 2194 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Cux1P53564 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cux1P53564 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cux1P53564 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC17.6■□□□□ 0.41
Cux1P53564 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cux1P53564 Gm5529-201ENSMUST00000165691 891 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Gm18014-201ENSMUST00000183369 817 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Gm35960-201ENSMUST00000202712 767 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.6■□□□□ 0.41
Cux1P53564 Olfr692-202ENSMUST00000217827 1126 ntBASIC17.6■□□□□ 0.41
Cux1P53564 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cux1P53564 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cux1P53564 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cux1P53564 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm14113-201ENSMUST00000121399 976 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Mup-ps29-201ENSMUST00000122281 202 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Gm9372-201ENSMUST00000168454 430 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms