Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.49□□□□□ -0.57
Pdx1P52946 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Pdx1P52946 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.48□□□□□ -0.57
Pdx1P52946 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.48□□□□□ -0.57
Pdx1P52946 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm23699-201ENSMUST00000158835 135 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Pdx1P52946 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pdx1P52946 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.48□□□□□ -0.57
Pdx1P52946 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.48□□□□□ -0.57
Pdx1P52946 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdx1P52946 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pdx1P52946 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Pdx1P52946 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdx1P52946 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm11500-201ENSMUST00000118237 601 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdx1P52946 B9d1os-201ENSMUST00000137010 674 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm20495-201ENSMUST00000173902 235 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pdx1P52946 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdx1P52946 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pdx1P52946 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pdx1P52946 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdx1P52946 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms