Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm7504-201ENSMUST00000201449 424 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Gm8574-201ENSMUST00000203207 924 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Shmt1P50431 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.29□□□□□ -0.44
Shmt1P50431 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.29□□□□□ -0.44
Shmt1P50431 Lect2-202ENSMUST00000225183 823 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shmt1P50431 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shmt1P50431 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shmt1P50431 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shmt1P50431 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm17825-201ENSMUST00000206836 794 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Gm9132-201ENSMUST00000210182 832 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm18065-201ENSMUST00000221395 526 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.28□□□□□ -0.44
Shmt1P50431 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt1P50431 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.28□□□□□ -0.44
Shmt1P50431 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.27□□□□□ -0.44
Shmt1P50431 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.27□□□□□ -0.44
Shmt1P50431 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt1P50431 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Shmt1P50431 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Shmt1P50431 Gm14585-201ENSMUST00000120713 634 ntBASIC12.27□□□□□ -0.45
Shmt1P50431 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.27□□□□□ -0.45
Shmt1P50431 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.27□□□□□ -0.45
Shmt1P50431 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.27□□□□□ -0.45
Shmt1P50431 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Shmt1P50431 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms