Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm28937-201ENSMUST00000185413 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm29400-201ENSMUST00000187208 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm28662-201ENSMUST00000188446 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm28251-201ENSMUST00000188835 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm37318-201ENSMUST00000194325 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm38017-201ENSMUST00000194768 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm37287-201ENSMUST00000195449 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm37793-201ENSMUST00000195548 695 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm6450-201ENSMUST00000200896 574 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.2□□□□□ -0.62
Tnfsf4P43488 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfsf4P43488 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.19□□□□□ -0.62
Tnfsf4P43488 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Mir7085-201ENSMUST00000184353 66 ntBASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gm44651-201ENSMUST00000207343 372 ntBASIC11.19□□□□□ -0.62
Tnfsf4P43488 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfsf4P43488 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm27516-201ENSMUST00000184237 98 ntBASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfsf4P43488 Gm43966-201ENSMUST00000203301 612 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms