Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
HttP42859 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.96□□□□□ -0.49
HttP42859 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Gm12947-201ENSMUST00000116114 420 ntBASIC11.96□□□□□ -0.49
HttP42859 Gm14571-201ENSMUST00000118292 570 ntBASIC11.96□□□□□ -0.49
HttP42859 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC11.96□□□□□ -0.49
HttP42859 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.96□□□□□ -0.49
HttP42859 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HttP42859 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11.96□□□□□ -0.5
HttP42859 Gm15132-201ENSMUST00000118581 652 ntBASIC11.96□□□□□ -0.5
HttP42859 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.96□□□□□ -0.5
HttP42859 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
HttP42859 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.96□□□□□ -0.5
HttP42859 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.96□□□□□ -0.5
HttP42859 Mir8104-201ENSMUST00000185165 101 ntBASIC11.96□□□□□ -0.5
HttP42859 Gm3527-201ENSMUST00000198905 460 ntBASIC11.96□□□□□ -0.5
HttP42859 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
HttP42859 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.96□□□□□ -0.5
HttP42859 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.96□□□□□ -0.5
HttP42859 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
HttP42859 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.96□□□□□ -0.5
HttP42859 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HttP42859 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
HttP42859 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Gm24161-201ENSMUST00000104592 130 ntBASIC11.95□□□□□ -0.5
HttP42859 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC11.95□□□□□ -0.5
HttP42859 Gm12254-201ENSMUST00000134617 471 ntBASIC11.95□□□□□ -0.5
HttP42859 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.95□□□□□ -0.5
HttP42859 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.95□□□□□ -0.5
HttP42859 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.95□□□□□ -0.5
HttP42859 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.95□□□□□ -0.5
HttP42859 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
HttP42859 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Gm13758-201ENSMUST00000118699 743 ntBASIC11.95□□□□□ -0.5
HttP42859 Gm12240-201ENSMUST00000120178 229 ntBASIC11.95□□□□□ -0.5
HttP42859 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.95□□□□□ -0.5
HttP42859 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Gm45308-201ENSMUST00000210610 415 ntBASIC11.95□□□□□ -0.5
HttP42859 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC11.95□□□□□ -0.5
HttP42859 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.95□□□□□ -0.5
HttP42859 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.95□□□□□ -0.5
HttP42859 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
HttP42859 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HttP42859 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
HttP42859 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.95□□□□□ -0.5
HttP42859 Gm17799-201ENSMUST00000183270 667 ntBASIC11.95□□□□□ -0.5
HttP42859 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.95□□□□□ -0.5
HttP42859 AC124772.3-201ENSMUST00000222535 575 ntBASIC11.95□□□□□ -0.5
HttP42859 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HttP42859 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HttP42859 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HttP42859 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HttP42859 Gm20474-201ENSMUST00000180089 596 ntBASIC11.94□□□□□ -0.5
HttP42859 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.94□□□□□ -0.5
HttP42859 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.94□□□□□ -0.5
HttP42859 Gm7565-201ENSMUST00000203611 623 ntBASIC11.94□□□□□ -0.5
HttP42859 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm25483-201ENSMUST00000083224 227 ntBASIC11.94□□□□□ -0.5
HttP42859 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.94□□□□□ -0.5
HttP42859 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.94□□□□□ -0.5
HttP42859 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms