Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.59□□□□□ -0.87
Timp3P39876 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm37835-201ENSMUST00000193305 361 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.59□□□□□ -0.87
Timp3P39876 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.59□□□□□ -0.87
Timp3P39876 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.59□□□□□ -0.87
Timp3P39876 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.59□□□□□ -0.87
Timp3P39876 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Timp3P39876 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Timp3P39876 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.58□□□□□ -0.88
Timp3P39876 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.58□□□□□ -0.88
Timp3P39876 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.58□□□□□ -0.88
Timp3P39876 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.58□□□□□ -0.88
Timp3P39876 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm12176-201ENSMUST00000121420 875 ntBASIC9.58□□□□□ -0.88
Timp3P39876 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.58□□□□□ -0.88
Timp3P39876 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Timp3P39876 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm4034-201ENSMUST00000187674 480 ntBASIC9.58□□□□□ -0.88
Timp3P39876 Gm5733-201ENSMUST00000190232 939 ntBASIC9.58□□□□□ -0.88
Timp3P39876 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.58□□□□□ -0.88
Timp3P39876 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.58□□□□□ -0.88
Timp3P39876 Gm45118-201ENSMUST00000208928 825 ntBASIC9.58□□□□□ -0.88
Timp3P39876 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm2553-201ENSMUST00000215986 605 ntBASIC9.58□□□□□ -0.88
Timp3P39876 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.58□□□□□ -0.88
Timp3P39876 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.58□□□□□ -0.88
Timp3P39876 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Timp3P39876 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Timp3P39876 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Timp3P39876 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Timp3P39876 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Timp3P39876 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.57□□□□□ -0.88
Timp3P39876 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Timp3P39876 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.57□□□□□ -0.88
Timp3P39876 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Timp3P39876 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.57□□□□□ -0.88
Timp3P39876 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms