Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fen1P39749 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fen1P39749 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm11700-201ENSMUST00000119409 403 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.69□□□□□ -0.54
Fen1P39749 Gm2546-201ENSMUST00000182630 991 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Fen1P39749 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.69□□□□□ -0.54
Fen1P39749 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm3961-201ENSMUST00000204425 994 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Gm9996-201ENSMUST00000070359 913 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.69□□□□□ -0.54
Fen1P39749 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.69□□□□□ -0.54
Fen1P39749 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fen1P39749 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Fen1P39749 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fen1P39749 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.68□□□□□ -0.54
Fen1P39749 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Fen1P39749 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fen1P39749 Gm14441-201ENSMUST00000121960 540 ntBASIC11.68□□□□□ -0.54
Fen1P39749 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.68□□□□□ -0.54
Fen1P39749 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Gm25043-201ENSMUST00000158604 212 ntBASIC11.68□□□□□ -0.54
Fen1P39749 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.68□□□□□ -0.54
Fen1P39749 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Fen1P39749 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.68□□□□□ -0.54
Fen1P39749 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.68□□□□□ -0.54
Fen1P39749 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fen1P39749 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.68□□□□□ -0.54
Fen1P39749 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fen1P39749 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms