Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Traf2P39429 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Traf2P39429 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.71□□□□□ -0.53
Traf2P39429 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Traf2P39429 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
Traf2P39429 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Traf2P39429 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gm11700-201ENSMUST00000119409 403 ntBASIC11.71□□□□□ -0.53
Traf2P39429 Gm13461-201ENSMUST00000120980 662 ntBASIC11.71□□□□□ -0.53
Traf2P39429 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gm16570-201ENSMUST00000161951 436 ntBASIC11.71□□□□□ -0.53
Traf2P39429 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Traf2P39429 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.71□□□□□ -0.53
Traf2P39429 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Traf2P39429 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Traf2P39429 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Traf2P39429 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.71□□□□□ -0.54
Traf2P39429 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Traf2P39429 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Traf2P39429 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Traf2P39429 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Traf2P39429 Rgr-203ENSMUST00000225070 4704 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Gm24891-201ENSMUST00000104391 136 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.7□□□□□ -0.54
Traf2P39429 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Gm7940-201ENSMUST00000218195 769 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Gm6867-201ENSMUST00000219165 425 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.7□□□□□ -0.54
Traf2P39429 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Traf2P39429 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf2P39429 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf2P39429 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf2P39429 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf2P39429 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf2P39429 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf2P39429 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Traf2P39429 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.69□□□□□ -0.54
Traf2P39429 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf2P39429 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Traf2P39429 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.69□□□□□ -0.54
Traf2P39429 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms