Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.18□□□□□ -0.94
Rom1P32958 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.18□□□□□ -0.94
Rom1P32958 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Gm11573-201ENSMUST00000119956 394 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm12164-201ENSMUST00000121695 551 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.18□□□□□ -0.94
Rom1P32958 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm16379-201ENSMUST00000161469 348 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Gm9002-201ENSMUST00000178437 499 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm29649-201ENSMUST00000185649 419 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm8762-201ENSMUST00000193486 339 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Rom1P32958 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rom1P32958 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rom1P32958 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rom1P32958 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.18□□□□□ -0.94
Rom1P32958 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rom1P32958 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Rom1P32958 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Gm11591-201ENSMUST00000120063 702 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.17□□□□□ -0.94
Rom1P32958 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.17□□□□□ -0.94
Rom1P32958 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Mir6977-201ENSMUST00000184960 64 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Gm37597-201ENSMUST00000191853 382 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.17□□□□□ -0.94
Rom1P32958 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.17□□□□□ -0.94
Rom1P32958 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.17□□□□□ -0.94
Rom1P32958 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.17□□□□□ -0.94
Rom1P32958 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms