Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Syt7-204ENSMUST00000223586 1344 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.67□□□□□ -0.7
Nedd8P29595 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Nedd8P29595 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Nedd8P29595 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm13616-201ENSMUST00000120600 222 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Gm11960-201ENSMUST00000122068 925 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Mir7684-201ENSMUST00000183858 60 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm44405-201ENSMUST00000198952 126 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Gm18711-201ENSMUST00000199341 750 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nedd8P29595 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.67□□□□□ -0.7
Nedd8P29595 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nedd8P29595 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nedd8P29595 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm12203-201ENSMUST00000118235 598 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm12209-201ENSMUST00000120089 596 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Gm45925-201ENSMUST00000218882 744 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.66□□□□□ -0.7
Nedd8P29595 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nedd8P29595 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nedd8P29595 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nedd8P29595 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.66□□□□□ -0.7
Nedd8P29595 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nedd8P29595 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nedd8P29595 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms