Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Gm12502-201ENSMUST00000120197 444 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Gm13616-201ENSMUST00000120600 222 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Mir8102-201ENSMUST00000184148 139 ntBASIC12.07□□□□□ -0.48
H2afxP27661 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.07□□□□□ -0.48
H2afxP27661 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Gm7287-201ENSMUST00000205267 602 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Gm6218-201ENSMUST00000219812 628 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Gm18624-201ENSMUST00000220966 658 ntBASIC12.07□□□□□ -0.48
H2afxP27661 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
H2afxP27661 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.06□□□□□ -0.48
H2afxP27661 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.06□□□□□ -0.48
H2afxP27661 Gm11573-201ENSMUST00000119956 394 ntBASIC12.06□□□□□ -0.48
H2afxP27661 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.06□□□□□ -0.48
H2afxP27661 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afxP27661 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afxP27661 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.06□□□□□ -0.48
H2afxP27661 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.06□□□□□ -0.48
H2afxP27661 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
H2afxP27661 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H2afxP27661 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H2afxP27661 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms