Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Col8a2P25318 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.69□□□□□ -0.86
Col8a2P25318 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.69□□□□□ -0.86
Col8a2P25318 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Gm15881-201ENSMUST00000148792 942 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Col8a2P25318 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.69□□□□□ -0.86
Col8a2P25318 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.69□□□□□ -0.86
Col8a2P25318 Gm27910-201ENSMUST00000185004 107 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Mir8093-201ENSMUST00000185043 137 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Gm29499-201ENSMUST00000189151 486 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Gm28329-201ENSMUST00000191208 689 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Gm29171-201ENSMUST00000191397 486 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Gm37458-201ENSMUST00000194055 410 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Gm9463-201ENSMUST00000206707 601 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Gm45398-201ENSMUST00000210561 165 ntBASIC9.69□□□□□ -0.86
Col8a2P25318 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Col8a2P25318 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col8a2P25318 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.69□□□□□ -0.86
Col8a2P25318 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col8a2P25318 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.68□□□□□ -0.86
Col8a2P25318 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Gm11700-201ENSMUST00000119409 403 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Gm42657-201ENSMUST00000201746 211 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Gm8342-201ENSMUST00000209839 757 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Gm2517-201ENSMUST00000215651 348 ntBASIC9.68□□□□□ -0.86
Col8a2P25318 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col8a2P25318 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col8a2P25318 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col8a2P25318 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms