Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Clk1P22518 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm43457-201ENSMUST00000200867 2409 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.95□□□□□ -0.66
Clk1P22518 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.95□□□□□ -0.66
Clk1P22518 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm13350-201ENSMUST00000120519 479 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.95□□□□□ -0.66
Clk1P22518 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm25890-201ENSMUST00000177643 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Gm22614-201ENSMUST00000178300 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Clk1P22518 Gm22042-201ENSMUST00000082989 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Gm26110-201ENSMUST00000083971 165 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Clk1P22518 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clk1P22518 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clk1P22518 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.95□□□□□ -0.66
Clk1P22518 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.94□□□□□ -0.66
Clk1P22518 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.94□□□□□ -0.66
Clk1P22518 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
Clk1P22518 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.94□□□□□ -0.66
Clk1P22518 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.94□□□□□ -0.66
Clk1P22518 Gzmn-202ENSMUST00000225535 989 ntBASIC10.94□□□□□ -0.66
Clk1P22518 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Clk1P22518 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Clk1P22518 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Olfr582-201ENSMUST00000098212 960 ntBASIC10.94□□□□□ -0.66
Clk1P22518 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.94□□□□□ -0.66
Clk1P22518 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clk1P22518 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clk1P22518 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms