Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.19□□□□□ -0.62
BdnfP21237 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.19□□□□□ -0.62
BdnfP21237 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Lect2-202ENSMUST00000225183 823 ntBASIC11.19□□□□□ -0.62
BdnfP21237 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.19□□□□□ -0.62
BdnfP21237 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.19□□□□□ -0.62
BdnfP21237 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
BdnfP21237 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
BdnfP21237 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
BdnfP21237 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Gm37813-201ENSMUST00000195003 3695 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Gm12241-201ENSMUST00000118330 726 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Gm15547-201ENSMUST00000122152 333 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.18□□□□□ -0.62
BdnfP21237 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Gm38241-201ENSMUST00000192641 898 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Gm38314-201ENSMUST00000195709 625 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.18□□□□□ -0.62
BdnfP21237 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.18□□□□□ -0.62
BdnfP21237 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.18□□□□□ -0.62
BdnfP21237 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
BdnfP21237 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
BdnfP21237 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
BdnfP21237 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
BdnfP21237 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Gm11439-201ENSMUST00000118598 409 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Gm11960-201ENSMUST00000122068 925 ntBASIC11.17□□□□□ -0.62
BdnfP21237 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
BdnfP21237 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.17□□□□□ -0.62
BdnfP21237 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.17□□□□□ -0.62
BdnfP21237 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms