Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.82□□□□□ -0.84
Tnfrsf9P20334 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Tnfrsf9P20334 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm37608-201ENSMUST00000195696 1880 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Mir706-201ENSMUST00000102262 84 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm10051-201ENSMUST00000145209 414 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm8190-201ENSMUST00000199603 586 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm44551-201ENSMUST00000208804 171 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm44548-201ENSMUST00000208929 192 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tnfrsf9P20334 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tnfrsf9P20334 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tnfrsf9P20334 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tnfrsf9P20334 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tnfrsf9P20334 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms