Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rb1P13405 Gm14724-201ENSMUST00000118400 537 ntBASIC12.02□□□□□ -0.49
Rb1P13405 Gm8566-201ENSMUST00000120174 465 ntBASIC12.02□□□□□ -0.49
Rb1P13405 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.02□□□□□ -0.49
Rb1P13405 Gm8343-201ENSMUST00000182705 994 ntBASIC12.02□□□□□ -0.49
Rb1P13405 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Rb1P13405 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rb1P13405 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.02□□□□□ -0.49
Rb1P13405 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rb1P13405 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.02□□□□□ -0.49
Rb1P13405 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rb1P13405 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rb1P13405 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rb1P13405 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Gm24231-201ENSMUST00000104315 133 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rb1P13405 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Rb1P13405 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.01□□□□□ -0.49
Rb1P13405 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rb1P13405 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Rb1P13405 Gm8100-201ENSMUST00000182906 988 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm5733-201ENSMUST00000190232 939 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm2965-201ENSMUST00000198365 343 ntBASIC12.01□□□□□ -0.49
Rb1P13405 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Gm7600-201ENSMUST00000209657 785 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.01□□□□□ -0.49
Rb1P13405 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm10752-201ENSMUST00000218348 729 ntBASIC12.01□□□□□ -0.49
Rb1P13405 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Gm5455-201ENSMUST00000058710 715 ntBASIC12.01□□□□□ -0.49
Rb1P13405 Ginm1-202ENSMUST00000065124 300 ntBASIC12.01□□□□□ -0.49
Rb1P13405 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.01□□□□□ -0.49
Rb1P13405 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rb1P13405 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.01□□□□□ -0.49
Rb1P13405 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rb1P13405 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Rb1P13405 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12□□□□□ -0.49
Rb1P13405 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rb1P13405 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rb1P13405 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rb1P13405 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rb1P13405 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12□□□□□ -0.49
Rb1P13405 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12□□□□□ -0.49
Rb1P13405 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rb1P13405 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12□□□□□ -0.49
Rb1P13405 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms