Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.25□□□□□ -0.77
Ccl3P10855 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ccl3P10855 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl3P10855 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Ccl3P10855 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Paupar-201ENSMUST00000194826 3482 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ccl3P10855 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm15036-201ENSMUST00000118880 400 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Gm15003-201ENSMUST00000118884 446 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Gm13445-201ENSMUST00000121664 307 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Gm25545-201ENSMUST00000122673 323 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.24□□□□□ -0.77
Ccl3P10855 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.24□□□□□ -0.77
Ccl3P10855 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.24□□□□□ -0.77
Ccl3P10855 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm16030-201ENSMUST00000159098 603 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm27390-201ENSMUST00000184516 176 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.24□□□□□ -0.77
Ccl3P10855 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.24□□□□□ -0.77
Ccl3P10855 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl3P10855 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Ccl3P10855 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ccl3P10855 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl3P10855 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl3P10855 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms