Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.67□□□□□ -0.7
P01852 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.67□□□□□ -0.7
P01852 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P01852 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.67□□□□□ -0.7
P01852 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.66□□□□□ -0.7
P01852 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.66□□□□□ -0.7
P01852 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.66□□□□□ -0.7
P01852 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P01852 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.66□□□□□ -0.7
P01852 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P01852 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.66□□□□□ -0.7
P01852 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Gm13263-201ENSMUST00000121271 838 ntBASIC10.66□□□□□ -0.7
P01852 Gm8199-201ENSMUST00000121323 823 ntBASIC10.66□□□□□ -0.7
P01852 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.66□□□□□ -0.7
P01852 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
P01852 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.66□□□□□ -0.7
P01852 Gm27530-201ENSMUST00000184096 98 ntBASIC10.66□□□□□ -0.7
P01852 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.66□□□□□ -0.7
P01852 Gm5714-201ENSMUST00000197343 566 ntBASIC10.66□□□□□ -0.7
P01852 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.66□□□□□ -0.7
P01852 Gm45575-201ENSMUST00000210283 548 ntBASIC10.66□□□□□ -0.7
P01852 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.66□□□□□ -0.7
P01852 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.66□□□□□ -0.7
P01852 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.66□□□□□ -0.7
P01852 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
P01852 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P01852 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.65□□□□□ -0.7
P01852 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.65□□□□□ -0.7
P01852 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.65□□□□□ -0.7
P01852 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.65□□□□□ -0.7
P01852 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
P01852 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
P01852 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.65□□□□□ -0.7
P01852 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Gm13461-201ENSMUST00000120980 662 ntBASIC10.65□□□□□ -0.7
P01852 B9d1os-201ENSMUST00000137010 674 ntBASIC10.65□□□□□ -0.7
P01852 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.65□□□□□ -0.7
P01852 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.65□□□□□ -0.7
P01852 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.65□□□□□ -0.7
P01852 Gm6450-201ENSMUST00000200896 574 ntBASIC10.65□□□□□ -0.7
P01852 Gm18753-201ENSMUST00000201000 566 ntBASIC10.65□□□□□ -0.7
P01852 Nsd1-205ENSMUST00000224693 852 ntBASIC10.65□□□□□ -0.7
P01852 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.65□□□□□ -0.7
P01852 Spcs1-203ENSMUST00000226374 592 ntBASIC10.65□□□□□ -0.7
P01852 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P01852 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms