Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.02□□□□□ -0.8
Igh-VJ558P01758 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igh-VJ558P01758 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm13916-201ENSMUST00000117368 628 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm12501-201ENSMUST00000119163 529 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm13461-201ENSMUST00000120980 662 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Mir6420-201ENSMUST00000185032 102 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 AU022133-201ENSMUST00000200601 873 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igh-VJ558P01758 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm6439-201ENSMUST00000199849 862 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm6108-201ENSMUST00000208365 367 ntBASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Igh-VJ558P01758 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms