Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm13045-201ENSMUST00000119019 712 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm8459-201ENSMUST00000162504 760 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm43378-201ENSMUST00000199336 582 ntBASIC11.53□□□□□ -0.56
Pdlim1O70400 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pdlim1O70400 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim1O70400 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim1O70400 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Pdlim1O70400 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.52□□□□□ -0.56
Pdlim1O70400 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pdlim1O70400 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim1O70400 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm12165-201ENSMUST00000117047 342 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm3150-201ENSMUST00000166418 204 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm26461-201ENSMUST00000175064 290 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm44506-201ENSMUST00000206278 965 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Ginm1-202ENSMUST00000065124 300 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim1O70400 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms