Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm24791-201ENSMUST00000104284 131 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm20392-201ENSMUST00000173047 701 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Mt1-202ENSMUST00000211807 1085 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.79□□□□□ -0.36
Trdmt1O55055 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Pck2-205ENSMUST00000226352 2784 ntBASIC12.79□□□□□ -0.36
Trdmt1O55055 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm25148-201ENSMUST00000104611 123 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm29067-201ENSMUST00000190821 470 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm6423-201ENSMUST00000204315 934 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm6390-201ENSMUST00000215034 589 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.78□□□□□ -0.36
Trdmt1O55055 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.78□□□□□ -0.36
Trdmt1O55055 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdmt1O55055 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Trdmt1O55055 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trdmt1O55055 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.77□□□□□ -0.36
Trdmt1O55055 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdmt1O55055 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trdmt1O55055 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm8302-201ENSMUST00000119217 852 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm15197-201ENSMUST00000120526 478 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm13445-201ENSMUST00000121664 307 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm5257-201ENSMUST00000121823 790 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trdmt1O55055 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm24992-201ENSMUST00000157412 130 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm16030-201ENSMUST00000159098 603 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm44647-201ENSMUST00000207402 428 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm5599-201ENSMUST00000209602 788 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.77□□□□□ -0.37
Trdmt1O55055 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.77□□□□□ -0.37
Trdmt1O55055 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms