Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Alx4O35137 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Alx4O35137 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Gm12463-201ENSMUST00000118271 849 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Gm13786-201ENSMUST00000122371 333 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm5982-201ENSMUST00000196234 512 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.38□□□□□ -0.75
Alx4O35137 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Alx4O35137 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.38□□□□□ -0.75
Alx4O35137 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Alx4O35137 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.38□□□□□ -0.75
Alx4O35137 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Alx4O35137 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.37□□□□□ -0.75
Alx4O35137 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.37□□□□□ -0.75
Alx4O35137 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.37□□□□□ -0.75
Alx4O35137 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.37□□□□□ -0.75
Alx4O35137 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.37□□□□□ -0.75
Alx4O35137 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Gm26956-201ENSMUST00000182176 986 ntBASIC10.37□□□□□ -0.75
Alx4O35137 Gm5370-201ENSMUST00000187187 574 ntBASIC10.37□□□□□ -0.75
Alx4O35137 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.37□□□□□ -0.75
Alx4O35137 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.37□□□□□ -0.75
Alx4O35137 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.37□□□□□ -0.75
Alx4O35137 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.37□□□□□ -0.75
Alx4O35137 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.37□□□□□ -0.75
Alx4O35137 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.37□□□□□ -0.75
Alx4O35137 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Alx4O35137 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Alx4O35137 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Alx4O35137 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Alx4O35137 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms